sc-PDB

List of CHEMBLId :

This value allows a number of roughly comparable measures of half-maximal response concentration/potency/affinity to be compared on a negative logarithmic scale (e.g., an IC50 measurement of 1nM would have a pChEMBL value of 9).

Uniprot Annotation

Name:	Ribosome-inactivating protein alpha-trichosanthin
ID:	RIPT_TRIKI
AC:	P09989
Organism:	Trichosanthes kirilowii
Reign:	Eukaryota
TaxID:	3677
EC Number:	3.2.2.22

---

Chains:

Chain Name:	Percentage of Residues within binding site
A	100 %

---

Ligand binding site composition:

B-Factor:	20.721
Number of residues:	27
Including
Standard Amino Acids:	25
Non Standard Amino Acids:	0
Water Molecules:	2
Cofactors:
Metals:

---

Cavity properties

Ligandability	Volume (Å3)
0.072	283.500

% Hydrophobic	% Polar
38.10	61.90
According to VolSite

HET Code:	FMC
Formula:	C10H13N5O4
Molecular weight:	267.241 g/mol
DrugBank ID:	DB02281
Buried Surface Area:	64.38 %
Polar Surface area:	150.4 Å2

Number of
H-Bond Acceptors:	8
H-Bond Donors:	5
Rings:	3
Aromatic rings:	2
Anionic atoms:	0
Cationic atoms:	0
Rule of Five Violation:	0
Rotatable Bonds:	2

---

Mass center Coordinates

X	Y	Z
16.2179	-4.58132	38.4645

• 2D View
• 3D View