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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
5cdtNAJAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
5cdtNAJAlcohol dehydrogenase E chain1.1.1.11.000
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.760
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.714
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.659
1hetNADAlcohol dehydrogenase E chain1.1.1.10.657
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.655
4xd2NAIAlcohol dehydrogenase E chain1.1.1.10.654
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.640
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.639
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.636
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.632
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.629
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.626
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.621
3oq6PFBAlcohol dehydrogenase E chain1.1.1.10.619
4dxhNAJAlcohol dehydrogenase E chain1.1.1.10.603
1heuNADAlcohol dehydrogenase E chain1.1.1.10.596
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.589
5kjePFBAlcohol dehydrogenase E chain1.1.1.10.585
4dwvPFBAlcohol dehydrogenase E chain1.1.1.10.582
5cdgPFBAlcohol dehydrogenase E chain1.1.1.10.561
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.558
4nfsNAJAlcohol dehydrogenase E chain1.1.1.10.558
5kj1PFBAlcohol dehydrogenase E chain1.1.1.10.555
5kjcPFBAlcohol dehydrogenase E chain1.1.1.10.554
5cdsPFBAlcohol dehydrogenase E chain1.1.1.10.552
1hldNADAlcohol dehydrogenase E chain1.1.1.10.550
5cdtPFBAlcohol dehydrogenase E chain1.1.1.10.550
4nfhPFBAlcohol dehydrogenase E chain1.1.1.10.549
5kj6PFBAlcohol dehydrogenase E chain1.1.1.10.548
4ng5PFBAlcohol dehydrogenase E chain1.1.1.10.544
5kcpPFBAlcohol dehydrogenase E chain1.1.1.10.530
6adhNADAlcohol dehydrogenase E chain1.1.1.10.521
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.486
4rquNADAlcohol dehydrogenase class-P/0.474
4dlbNADS-(hydroxymethyl)glutathione dehydrogenase/0.466
3wleNAD(R)-specific carbonyl reductase/0.463
4c4oNADSADH/0.454
5kczNAJAlcohol dehydrogenase E chain1.1.1.10.454
1e3eNAIAlcohol dehydrogenase 41.1.1.10.453
1ldeNADAlcohol dehydrogenase E chain1.1.1.10.447
1qlhNADAlcohol dehydrogenase E chain1.1.1.10.447
1e3lNADAlcohol dehydrogenase 41.1.1.10.445
1ma0NADAlcohol dehydrogenase class-31.1.1.10.441