Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4zz7 | NAD | Methylmalonate-semialdehyde dehydrogenase |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
4zz7 | NAD | Methylmalonate-semialdehyde dehydrogenase | / | 1.000 | |
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.515 | |
4fqf | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.511 | |
1o02 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.506 | |
1o00 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.505 | |
3n82 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.492 | |
4pz2 | NAD | Aldehyde dehydrogenase 2-6 | / | 0.492 | |
1o04 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.490 | |
1o01 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.486 | |
1nzx | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.477 | |
2eii | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.475 | |
1nzw | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.462 | |
2j40 | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.462 | |
4fr8 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.462 | |
2bhp | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.461 | |
1cw3 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.459 | |
4fr8 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.457 | |
1nzz | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.454 | |
2onm | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.454 | |
3ju8 | NAD | N-succinylglutamate 5-semialdehyde dehydrogenase | 1.2.1.71 | 0.454 | |
4pt0 | NAD | Aldehyde dehydrogenase | / | 0.453 | |
3v9l | NAD | Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial | 1.2.1.88 | 0.452 | |
2ehu | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.446 | |
2onm | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.440 |