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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4xd2NAIAlcohol dehydrogenase E chain1.1.1.1

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4xd2NAIAlcohol dehydrogenase E chain1.1.1.11.000
5kjcNAJAlcohol dehydrogenase E chain1.1.1.10.806
4nfhNAJAlcohol dehydrogenase E chain1.1.1.10.781
3oq6NAJAlcohol dehydrogenase E chain1.1.1.10.766
5kjeNAJAlcohol dehydrogenase E chain1.1.1.10.749
5kjfNAJAlcohol dehydrogenase E chain1.1.1.10.661
4dwvNAJAlcohol dehydrogenase E chain1.1.1.10.637
5cdgNAJAlcohol dehydrogenase E chain1.1.1.10.631
5cdtPFBAlcohol dehydrogenase E chain1.1.1.10.630
5kj1PFBAlcohol dehydrogenase E chain1.1.1.10.629
1hetNADAlcohol dehydrogenase E chain1.1.1.10.609
5kjcPFBAlcohol dehydrogenase E chain1.1.1.10.608
5kcpNAJAlcohol dehydrogenase E chain1.1.1.10.600
5kj6NAJAlcohol dehydrogenase E chain1.1.1.10.596
4ng5NAJAlcohol dehydrogenase E chain1.1.1.10.591
5cdsPFBAlcohol dehydrogenase E chain1.1.1.10.587
1heuNADAlcohol dehydrogenase E chain1.1.1.10.577
4nfhPFBAlcohol dehydrogenase E chain1.1.1.10.566
5cdtNAJAlcohol dehydrogenase E chain1.1.1.10.563
5kj1NAJAlcohol dehydrogenase E chain1.1.1.10.562
1ht0NADAlcohol dehydrogenase 1C1.1.1.10.558
5cdgPFBAlcohol dehydrogenase E chain1.1.1.10.537
1hf3NADAlcohol dehydrogenase E chain1.1.1.10.531
5kczNAJAlcohol dehydrogenase E chain1.1.1.10.514
1hldNADAlcohol dehydrogenase E chain1.1.1.10.493
6adhNADAlcohol dehydrogenase E chain1.1.1.10.489
1u3vNADAlcohol dehydrogenase 1B1.1.1.10.488
4ng5PFBAlcohol dehydrogenase E chain1.1.1.10.476
5kcpPFBAlcohol dehydrogenase E chain1.1.1.10.470
1agnNADAlcohol dehydrogenase class 4 mu/sigma chain1.1.1.10.469
4dxhNAJAlcohol dehydrogenase E chain1.1.1.10.469
5kj6PFBAlcohol dehydrogenase E chain1.1.1.10.465
4dwvPFBAlcohol dehydrogenase E chain1.1.1.10.462
3oq6PFBAlcohol dehydrogenase E chain1.1.1.10.456