sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4ug2 | NGI | Adenosine receptor A2a |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 4ug2 | NGI | Adenosine receptor A2a | / | 1.000 | |
| 2ydv | NEC | Adenosine receptor A2a | / | 0.592 | |
| 2ydo | ADN | Adenosine receptor A2a | / | 0.578 | |
| 4uhr | NGI | Adenosine receptor A2a | / | 0.559 | |
| 5k2a | ZMA | Adenosine receptor A2a | / | 0.546 | |
| 5k2c | ZMA | Adenosine receptor A2a | / | 0.540 | |
| 5iub | CLR | Adenosine receptor A2a | / | 0.535 | |
| 5iua | 6DX | Adenosine receptor A2a | / | 0.535 | |
| 5uvi | ZMA | Adenosine receptor A2a | / | 0.533 | |
| 5k2b | ZMA | Adenosine receptor A2a | / | 0.530 | |
| 5k2d | ZMA | Adenosine receptor A2a | / | 0.527 | |
| 5iu8 | 6DZ | Adenosine receptor A2a | / | 0.521 | |
| 5g53 | NEC | Adenosine receptor A2a | / | 0.520 | |
| 5jtb | ZMA | Adenosine receptor A2a | / | 0.517 | |
| 3eml | ZMA | Adenosine receptor A2a | / | 0.495 | |
| 5iu4 | ZMA | Adenosine receptor A2a | / | 0.494 | |
| 4eiy | ZMA | Adenosine receptor A2a | / | 0.490 | |
| 4o8a | FAD | Bifunctional protein PutA | 1.2.1.88 | 0.457 | |
| 3qak | UKA | Adenosine receptor A2a | / | 0.457 | |
| 4iaq | 2GM | 5-hydroxytryptamine receptor 1B | / | 0.456 | |
| 1y5r | C0R | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.450 | |
| 3dej | RXC | Caspase-3 | 3.4.22.56 | 0.447 | |
| 4qe6 | JN3 | Bile acid receptor | / | 0.445 |