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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4oviN01Phenylacetone monooxygenase1.14.13.92

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
4oviN01Phenylacetone monooxygenase1.14.13.921.000
4c77N01Phenylacetone monooxygenase1.14.13.920.626
4d03NAPPhenylacetone monooxygenase1.14.13.920.599
2ylrNAPPhenylacetone monooxygenase1.14.13.920.595
2ylxNAPPhenylacetone monooxygenase1.14.13.920.594
4d04NAPPhenylacetone monooxygenase1.14.13.920.594
2yltNAPPhenylacetone monooxygenase1.14.13.920.588
2ylwNAPPhenylacetone monooxygenase1.14.13.920.556
2ym2NAPPhenylacetone monooxygenase1.14.13.920.546
2ym1NAPPhenylacetone monooxygenase1.14.13.920.538
3gwdNAPCyclohexanone monooxygenase/0.475
3up4NAP2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.471