Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4keb | FOL | Dihydrofolate reductase | 1.5.1.3 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
4keb | FOL | Dihydrofolate reductase | 1.5.1.3 | 1.000 | |
1u72 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.622 | |
2w3m | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.611 | |
4kfj | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.603 | |
2dhf | DZF | Dihydrofolate reductase | 1.5.1.3 | 0.591 | |
4m6k | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.591 | |
3ghw | GHW | Dihydrofolate reductase | 1.5.1.3 | 0.581 | |
4m6l | 21V | Dihydrofolate reductase | 1.5.1.3 | 0.580 | |
1hfr | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.576 | |
3ntz | 3TZ | Dihydrofolate reductase | 1.5.1.3 | 0.573 | |
1ohj | COP | Dihydrofolate reductase | 1.5.1.3 | 0.568 | |
1kms | LIH | Dihydrofolate reductase | 1.5.1.3 | 0.550 | |
1u70 | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.550 | |
3l3r | OAG | Dihydrofolate reductase | 1.5.1.3 | 0.550 | |
3gi2 | GHW | Dihydrofolate reductase | 1.5.1.3 | 0.549 | |
3n0h | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.548 | |
2fzj | DH3 | Dihydrofolate reductase | 1.5.1.3 | 0.537 | |
1ohk | COP | Dihydrofolate reductase | 1.5.1.3 | 0.529 | |
3k45 | 51P | Dihydrofolate reductase | 1.5.1.3 | 0.528 | |
1hfq | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.524 | |
3gyf | 51P | Dihydrofolate reductase | 1.5.1.3 | 0.524 | |
3d80 | Q22 | Dihydrofolate reductase | 1.5.1.3 | 0.520 | |
1s3u | TQD | Dihydrofolate reductase | 1.5.1.3 | 0.513 | |
4kak | 06U | Dihydrofolate reductase | 1.5.1.3 | 0.510 | |
3ghv | GHC | Dihydrofolate reductase | 1.5.1.3 | 0.509 | |
1kmv | LII | Dihydrofolate reductase | 1.5.1.3 | 0.505 | |
1dls | MTX | Dihydrofolate reductase | 1.5.1.3 | 0.500 | |
1dhf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.499 | |
1drf | FOL | Dihydrofolate reductase | 1.5.1.3 | 0.497 | |
4eil | FOL | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.495 | |
1pd9 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.493 | |
1hfp | MOT | Dihydrofolate reductase | 1.5.1.3 | 0.490 | |
3nu0 | 3TU | Dihydrofolate reductase | 1.5.1.3 | 0.490 | |
3nxv | D2F | Dihydrofolate reductase | 1.5.1.3 | 0.490 | |
4kbn | 25U | Dihydrofolate reductase | 1.5.1.3 | 0.487 | |
4ky4 | 04J | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.487 | |
1pd8 | CO4 | Dihydrofolate reductase | 1.5.1.3 | 0.480 | |
1mvs | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.477 | |
3nrr | D16 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.473 | |
3nxt | D2E | Dihydrofolate reductase | 1.5.1.3 | 0.473 | |
1mvt | DTM | Dihydrofolate reductase | 1.5.1.3 | 0.470 | |
3um5 | CP6 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.466 | |
1s3v | TQD | Dihydrofolate reductase | 1.5.1.3 | 0.464 | |
2w3a | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.464 | |
3nxr | D2D | Dihydrofolate reductase | 1.5.1.3 | 0.462 | |
4kd7 | 9DR | Dihydrofolate reductase | 1.5.1.3 | 0.459 | |
3k47 | D09 | Dihydrofolate reductase | 1.5.1.3 | 0.451 | |
3qg2 | CP6 | Bifunctional dihydrofolate reductase-thymidylate synthase | / | 0.450 | |
1j3j | CP6 | Bifunctional dihydrofolate reductase-thymidylate synthase | 1.5.1.3 | 0.448 | |
3s3v | TOP | Dihydrofolate reductase | 1.5.1.3 | 0.448 |