sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4asy	N5Y	Glucose-1-phosphate thymidylyltransferase

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
4asy	N5Y	Glucose-1-phosphate thymidylyltransferase	/	1.000
1g2v	TTP	Glucose-1-phosphate thymidylyltransferase	/	0.505
5ify	UMP	Glucose-1-phosphate thymidylyltransferase	/	0.494
1fxo	TMP	Glucose-1-phosphate thymidylyltransferase	/	0.485
4ho8	THM	Glucose-1-phosphate thymidylyltransferase	/	0.476
4b5b	BBE	Glucose-1-phosphate thymidylyltransferase	/	0.464
1h5t	TYD	Glucose-1-phosphate thymidylyltransferase 1	/	0.458
4asj	N6A	Glucose-1-phosphate thymidylyltransferase	/	0.458
5cpb	NAD	Enoyl-[acyl-carrier-protein] reductase [NADH]	1.3.1.9	0.444
4b42	942	Glucose-1-phosphate thymidylyltransferase	/	0.442