Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3juoAJDPhenazine biosynthesis protein A/B

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3juoAJDPhenazine biosynthesis protein A/B/1.000
3juqAJDPhenazine biosynthesis protein A/B/0.569
3dzl3OCPhenazine biosynthesis protein A/B/0.553
3b4p3B4Phenazine biosynthesis protein A/B/0.530
3juqAKDPhenazine biosynthesis protein A/B/0.510
3junAKDPhenazine biosynthesis protein A/B/0.482
3junAJDPhenazine biosynthesis protein A/B/0.466