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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ictFADCoenzyme A disulfide reductase

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3ictFADCoenzyme A disulfide reductase/1.000
3icrFADCoenzyme A disulfide reductase/0.567
3ntaFADFAD-dependent pyridine nucleotide-disulphide oxidoreductase/0.538
3icsFADCoenzyme A disulfide reductase/0.527
3ntdFADFAD-dependent pyridine nucleotide-disulphide oxidoreductase/0.525
4ocgFADFAD-dependent pyridine nucleotide-disulphide oxidoreductase/0.501
2eq9FADDihydrolipoyl dehydrogenase/0.500
3cgbFADCoenzyme A disulfide reductase/0.484
3cgcFADCoenzyme A disulfide reductase/0.473
1zy8FADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.464
2eq6FADDihydrolipoyl dehydrogenase/0.458
3rnmFADDihydrolipoyl dehydrogenase, mitochondrial1.8.1.40.452
2qaeFADDihydrolipoyl dehydrogenase1.8.1.40.448
2yquFADDihydrolipoyl dehydrogenase/0.447
4eqwFADCoenzyme A disulfide reductase/0.446
4eqsFADCoenzyme A disulfide reductase/0.444
4jq9FADDihydrolipoyl dehydrogenase/0.441