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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fc5H4BNitric oxide synthase, brain1.14.13.39

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
3fc5H4BNitric oxide synthase, brain1.14.13.391.000
2g6iHBINitric oxide synthase, brain1.14.13.390.710
3b3oH4BNitric oxide synthase, brain1.14.13.390.673
3jt9H4BNitric oxide synthase, brain1.14.13.390.670
3jt5H4BNitric oxide synthase, brain1.14.13.390.661
3nnzH4BNitric oxide synthase, brain1.14.13.390.645
1zzrH4BNitric oxide synthase, brain1.14.13.390.623
4fvxH4BNitric oxide synthase, brain1.14.13.390.620
4fvzH4BNitric oxide synthase, brain1.14.13.390.615
2hx4H4BNitric oxide synthase, brain1.14.13.390.614
3jt8H4BNitric oxide synthase, brain1.14.13.390.609
1k2uH4BNitric oxide synthase, brain1.14.13.390.602
3jwvH4BNitric oxide synthase, brain1.14.13.390.600
3jt7H4BNitric oxide synthase, brain1.14.13.390.597
1k2tH4BNitric oxide synthase, brain1.14.13.390.594
3nlnH4BNitric oxide synthase, brain1.14.13.390.593
3b3nH4BNitric oxide synthase, brain1.14.13.390.592
4luxH4BNitric oxide synthase, brain1.14.13.390.587
1mmvH4BNitric oxide synthase, brain1.14.13.390.581
5agkH4BNitric oxide synthase, brain1.14.13.390.580
3ufqH4BNitric oxide synthase, brain1.14.13.390.575
1m00H4BNitric oxide synthase, brain1.14.13.390.570
4fw0H4BNitric oxide synthase, brain1.14.13.390.569
2g6j7APNitric oxide synthase, brain1.14.13.390.560
3q99H4BNitric oxide synthase, brain1.14.13.390.559
5aglH4BNitric oxide synthase, brain1.14.13.390.559
1rs7H4BNitric oxide synthase, brain1.14.13.390.558
4jsiH4BNitric oxide synthase, brain1.14.13.390.558
3tylH4BNitric oxide synthase, brain1.14.13.390.556
4jsgH4BNitric oxide synthase, brain1.14.13.390.556
1zzuH4BNitric oxide synthase, brain1.14.13.390.555
3jt6H4BNitric oxide synthase, brain1.14.13.390.554
1p6kH4BNitric oxide synthase, brain1.14.13.390.553
3jwtH4BNitric oxide synthase, brain1.14.13.390.553
4k5eH4BNitric oxide synthase, brain1.14.13.390.550
1om5H4BNitric oxide synthase, brain1.14.13.390.548
3n5vH4BNitric oxide synthase, brain1.14.13.390.546
4imtH4BNitric oxide synthase, brain1.14.13.390.546
3nnyH4BNitric oxide synthase, brain1.14.13.390.545
3q9aH4BNitric oxide synthase, brain1.14.13.390.541
4k5gH4BNitric oxide synthase, brain1.14.13.390.539
3jt4H4BNitric oxide synthase, brain1.14.13.390.538
4imuH4BNitric oxide synthase, brain1.14.13.390.538
3pngH4BNitric oxide synthase, brain1.14.13.390.537
3dqrH4BNitric oxide synthase, brain1.14.13.390.536
5agpH4BNitric oxide synthase, brain1.14.13.390.536
3jt3H4BNitric oxide synthase, brain1.14.13.390.535
3nlzH4BNitric oxide synthase, brain1.14.13.390.534
4k5fH4BNitric oxide synthase, brain1.14.13.390.534
3b3pH4BNitric oxide synthase, brain1.14.13.390.531
3jx3H4BNitric oxide synthase, brain1.14.13.390.529
3nlwH4BNitric oxide synthase, brain1.14.13.390.528
3jwuH4BNitric oxide synthase, brain1.14.13.390.526
3rqjH4BNitric oxide synthase, brain1.14.13.390.525
4cx3H4BNitric oxide synthase, brain1.14.13.390.525
3pnfH4BNitric oxide synthase, brain1.14.13.390.524
4k5dH4BNitric oxide synthase, brain1.14.13.390.524
3tymH4BNitric oxide synthase, brain1.14.13.390.521
3ufrH4BNitric oxide synthase, brain1.14.13.390.521
3ufvH4BNitric oxide synthase, brain1.14.13.390.521
1zzqH4BNitric oxide synthase, brain1.14.13.390.520
3n5zH4BNitric oxide synthase, brain1.14.13.390.519
3rqmH4BNitric oxide synthase, brain1.14.13.390.519
3jx2H4BNitric oxide synthase, brain1.14.13.390.517
4gqeH4BNitric oxide synthase, brain1.14.13.390.516
3jx5H4BNitric oxide synthase, brain1.14.13.390.513
3nlrH4BNitric oxide synthase, brain1.14.13.390.513
3nlkH4BNitric oxide synthase, brain1.14.13.390.508
4euxH4BNitric oxide synthase, brain1.14.13.390.507
3nloH4BNitric oxide synthase, brain1.14.13.390.506
3ufsH4BNitric oxide synthase, brain1.14.13.390.506
4cx5H4BNitric oxide synthase, brain1.14.13.390.506
3nlpH4BNitric oxide synthase, brain1.14.13.390.505
3n5yH4BNitric oxide synthase, brain1.14.13.390.504
3rqkH4BNitric oxide synthase, brain1.14.13.390.503
3n62XFJNitric oxide synthase, brain1.14.13.390.502
1rs6H4BNitric oxide synthase, brain1.14.13.390.501
3n5wXFJNitric oxide synthase, brain1.14.13.390.500
3nlqH4BNitric oxide synthase, brain1.14.13.390.500
3ufoH4BNitric oxide synthase, brain1.14.13.390.500
2hx3H4BNitric oxide synthase, brain1.14.13.390.499
3jwsJI4Nitric oxide synthase, brain1.14.13.390.498
3jx4H4BNitric oxide synthase, brain1.14.13.390.497
3ufuH4BNitric oxide synthase, brain1.14.13.390.497
3b3mH4BNitric oxide synthase, brain1.14.13.390.492
3n5xXFKNitric oxide synthase, brain1.14.13.390.492
3pneH4BNitric oxide synthase, brain1.14.13.390.492
3ufpH4BNitric oxide synthase, brain1.14.13.390.492
4jsfH4BNitric oxide synthase, brain1.14.13.390.492
4cx4H4BNitric oxide synthase, brain1.14.13.390.490
1p6jH4BNitric oxide synthase, brain1.14.13.390.489
4d1oH4BNitric oxide synthase, endothelial1.14.13.390.489
3nlvH4BNitric oxide synthase, brain1.14.13.390.488
3rqlH4BNitric oxide synthase, brain1.14.13.390.488
3svqH4BNitric oxide synthase, brain1.14.13.390.487
3tym08RNitric oxide synthase, brain1.14.13.390.486
3nljH4BNitric oxide synthase, brain1.14.13.390.485
3nlw3XFNitric oxide synthase, brain1.14.13.390.482
3n61H4BNitric oxide synthase, brain1.14.13.390.481
3jwtJI5Nitric oxide synthase, brain1.14.13.390.478
3jx6H4BNitric oxide synthase, brain1.14.13.390.478
1dwxH4BNitric oxide synthase, inducible1.14.13.390.468
3hsnH4BNitric oxide synthase, brain1.14.13.390.468
3uftH4BNitric oxide synthase, brain1.14.13.390.464
1r35H4BNitric oxide synthase, inducible1.14.13.390.463
3n65XFJNitric oxide synthase, brain1.14.13.390.463
3ufwH4BNitric oxide synthase, brain1.14.13.390.463
3nlrJRSNitric oxide synthase, brain1.14.13.390.462
4jseH4BNitric oxide synthase, brain1.14.13.390.462
3nosH4BNitric oxide synthase, endothelial1.14.13.390.457
4luxQJ8Nitric oxide synthase, brain1.14.13.390.457
3ufoHW4Nitric oxide synthase, brain1.14.13.390.455
3jx0JI4Nitric oxide synthase, brain1.14.13.390.451
3dwjH4BNitric oxide synthase, inducible1.14.13.390.450
3e7gH4BNitric oxide synthase, inducible1.14.13.390.450
3nnz59WNitric oxide synthase, brain1.14.13.390.449
3ufqHW5Nitric oxide synthase, brain1.14.13.390.449
3n5yXFLNitric oxide synthase, brain1.14.13.390.448
3nlz3XDNitric oxide synthase, brain1.14.13.390.448
4imwH4BNitric oxide synthase, brain1.14.13.390.448
3tylAXWNitric oxide synthase, brain1.14.13.390.447
4euxHW1Nitric oxide synthase, brain1.14.13.390.446
4cx5HW8Nitric oxide synthase, brain1.14.13.390.445
3nlnJRSNitric oxide synthase, brain1.14.13.390.444
3nlyH4BNitric oxide synthase, brain1.14.13.390.444
3svpH4BNitric oxide synthase, brain1.14.13.390.444
4imt1EWNitric oxide synthase, brain1.14.13.390.443
4k5gQ13Nitric oxide synthase, brain1.14.13.390.442
1k2sH4BNitric oxide synthase, brain1.14.13.390.440
3ej8H4BNitric oxide synthase, inducible1.14.13.390.440