sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2xvh	FAD	Putative flavin-containing monooxygenase

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
2xvh	FAD	Putative flavin-containing monooxygenase	/	1.000
2xvi	FAD	Putative flavin-containing monooxygenase	/	0.597
2xlp	FAD	Putative flavin-containing monooxygenase	/	0.571
2xvf	FAD	Putative flavin-containing monooxygenase	/	0.564
2vq7	FAD	Putative flavin-containing monooxygenase	/	0.554
2xve	FAD	Putative flavin-containing monooxygenase	/	0.543
2vqb	FAD	Putative flavin-containing monooxygenase	/	0.541
2xls	FAD	Putative flavin-containing monooxygenase	/	0.535
2xlr	FAD	Putative flavin-containing monooxygenase	/	0.521