Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 |
PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
---|---|---|---|---|---|
2onp | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 1.000 | |
3n82 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.683 | |
1o00 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.595 | |
4fqf | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.581 | |
4fr8 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.575 | |
1nzz | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.563 | |
1o01 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.550 | |
1nzw | NAI | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.545 | |
1nzx | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.531 | |
1o04 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.526 | |
1o02 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.516 | |
2bhp | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.514 | |
2onm | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.503 | |
4pz2 | NAD | Aldehyde dehydrogenase 2-6 | / | 0.502 | |
1cw3 | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.501 | |
2onm | NAD | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.495 | |
4fr8 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.481 | |
2eii | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.474 | |
2ehu | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.471 | |
3n83 | ADP | Aldehyde dehydrogenase, mitochondrial | 1.2.1.3 | 0.468 | |
2j5n | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.458 | |
4v37 | NAD | Betaine aldehyde dehydrogenase, chloroplastic | 1.2.1.8 | 0.458 | |
2ehq | NAP | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.454 | |
2j40 | NAD | 1-pyrroline-5-carboxylate dehydrogenase | / | 0.444 |