scPDB - Distribution of Cavity Similarity values of 2nod entry / Site 2

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2nod	H4B	Nitric oxide synthase, inducible	1.14.13.39

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity
2nod	H4B	Nitric oxide synthase, inducible	1.14.13.39	1.000
1dwx	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.601
3e6o	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.580
3e7g	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.564
1r35	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.540
3nw2	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.539
3e6t	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.537
3dwj	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.528
3ej8	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.524
1qom	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.521
1m8e	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.515
3ufq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.501
3nod	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.497
3nlv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.491
3tyl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.491
3png	H4B	Nitric oxide synthase, brain	1.14.13.39	0.486
4jsg	H4B	Nitric oxide synthase, brain	1.14.13.39	0.486
4k5e	H4B	Nitric oxide synthase, brain	1.14.13.39	0.486
3nny	H4B	Nitric oxide synthase, brain	1.14.13.39	0.485
1k2u	H4B	Nitric oxide synthase, brain	1.14.13.39	0.484
3n5z	H4B	Nitric oxide synthase, brain	1.14.13.39	0.483
3ufv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.483
3jwu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.482
3e7t	B14	Nitric oxide synthase, inducible	1.14.13.39	0.481
3ufr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.481
4fvz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.481
5agl	H4B	Nitric oxide synthase, brain	1.14.13.39	0.481
2hx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.480
3nly	H4B	Nitric oxide synthase, brain	1.14.13.39	0.479
1zzq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.477
4jsf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.477
4eux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.476
3dqr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.475
1rs6	H4B	Nitric oxide synthase, brain	1.14.13.39	0.474
3nlw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.474
3nnz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.474
4lux	H4B	Nitric oxide synthase, brain	1.14.13.39	0.474
1k2t	H4B	Nitric oxide synthase, brain	1.14.13.39	0.473
4cx5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.473
4gqe	H4B	Nitric oxide synthase, brain	1.14.13.39	0.473
4k5d	H4B	Nitric oxide synthase, brain	1.14.13.39	0.473
3b3p	H4B	Nitric oxide synthase, brain	1.14.13.39	0.472
3rqm	H4B	Nitric oxide synthase, brain	1.14.13.39	0.472
4k5g	H4B	Nitric oxide synthase, brain	1.14.13.39	0.472
3jwt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.471
4jsh	H4B	Nitric oxide synthase, brain	1.14.13.39	0.470
3e67	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.469
3nln	H4B	Nitric oxide synthase, brain	1.14.13.39	0.469
4fw0	H4B	Nitric oxide synthase, brain	1.14.13.39	0.469
3b3m	H4B	Nitric oxide synthase, brain	1.14.13.39	0.468
3nlo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.468
3ufw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.467
4imt	H4B	Nitric oxide synthase, brain	1.14.13.39	0.467
1m00	H4B	Nitric oxide synthase, brain	1.14.13.39	0.466
3pnf	H4B	Nitric oxide synthase, brain	1.14.13.39	0.466
3svq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.466
3nlk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.465
3rqk	H4B	Nitric oxide synthase, brain	1.14.13.39	0.465
1om5	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
2hx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
3nlz	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
3tym	H4B	Nitric oxide synthase, brain	1.14.13.39	0.464
3b3o	H4B	Nitric oxide synthase, brain	1.14.13.39	0.463
3ufo	H4B	Nitric oxide synthase, brain	1.14.13.39	0.463
1zzu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.462
3pne	H4B	Nitric oxide synthase, brain	1.14.13.39	0.462
4imw	H4B	Nitric oxide synthase, brain	1.14.13.39	0.462
4jsi	H4B	Nitric oxide synthase, brain	1.14.13.39	0.462
3jwv	H4B	Nitric oxide synthase, brain	1.14.13.39	0.461
3n5v	H4B	Nitric oxide synthase, brain	1.14.13.39	0.461
3n5y	H4B	Nitric oxide synthase, brain	1.14.13.39	0.461
3b3n	H4B	Nitric oxide synthase, brain	1.14.13.39	0.460
1p6k	H4B	Nitric oxide synthase, brain	1.14.13.39	0.459
1qw5	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.458
3e6o	A55	Nitric oxide synthase, inducible	1.14.13.39	0.458
3jx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.457
3nlp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.457
3e6t	1A2	Nitric oxide synthase, inducible	1.14.13.39	0.456
3rqj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.456
3ufp	H4B	Nitric oxide synthase, brain	1.14.13.39	0.456
3ufu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.456
4cx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.456
3e68	AT6	Nitric oxide synthase, inducible	1.14.13.39	0.454
1p6j	H4B	Nitric oxide synthase, brain	1.14.13.39	0.453
1vaf	H4B	Nitric oxide synthase, inducible	1.14.13.39	0.453
1zzr	H4B	Nitric oxide synthase, brain	1.14.13.39	0.453
3jx4	H4B	Nitric oxide synthase, brain	1.14.13.39	0.453
3nlq	H4B	Nitric oxide synthase, brain	1.14.13.39	0.452
4k5f	H4B	Nitric oxide synthase, brain	1.14.13.39	0.452
3jt9	H4B	Nitric oxide synthase, brain	1.14.13.39	0.451
1rs7	H4B	Nitric oxide synthase, brain	1.14.13.39	0.449
3jx2	H4B	Nitric oxide synthase, brain	1.14.13.39	0.446
4imu	H4B	Nitric oxide synthase, brain	1.14.13.39	0.446
4cx3	H4B	Nitric oxide synthase, brain	1.14.13.39	0.445
4jse	H4B	Nitric oxide synthase, brain	1.14.13.39	0.445
3n65	XFJ	Nitric oxide synthase, brain	1.14.13.39	0.442
3nlj	H4B	Nitric oxide synthase, brain	1.14.13.39	0.442
3jta	H4B	Nitric oxide synthase, brain	1.14.13.39	0.441
4d1o	H4B	Nitric oxide synthase, endothelial	1.14.13.39	0.441
3n5x	XFK	Nitric oxide synthase, brain	1.14.13.39	0.440