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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2iqdLPAAldose reductase1.1.1.21

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2iqdLPAAldose reductase1.1.1.211.000
2inzOHPAldose reductase1.1.1.210.831
2pdyFIDAldose reductase1.1.1.210.645
2fz8ZSTAldose reductase1.1.1.210.577
2f2kTGGAldose reductase1.1.1.210.562
3s3gTLTAldose reductase1.1.1.210.543
3u2cSUZAldose reductase1.1.1.210.543
1pwmFIDAldose reductase1.1.1.210.517
1ef3FIDAldose reductase1.1.1.210.496
2pdwFIDAldose reductase1.1.1.210.482
2pdg47DAldose reductase1.1.1.210.474
2pdfZSTAldose reductase1.1.1.210.473
2pdu393Aldose reductase1.1.1.210.473
2is72CLAldose reductase1.1.1.210.471
1ah0SBIAldose reductase1.1.1.210.465
2pd9FIDAldose reductase1.1.1.210.463
1ieiZESAldose reductase1.1.1.210.462
2nvcITAAldose reductase1.1.1.210.462
3p2vDOYAldose reductase1.1.1.210.462
2pdmZSTAldose reductase1.1.1.210.459
4gabFIDAldo-keto reductase family 1 member B101.1.10.458
2pdkSBIAldose reductase1.1.1.210.455
2fz9ZSTAldose reductase1.1.1.210.447
1ekoI84Aldose reductase1.1.1.210.445