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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Cavity similarities measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2b5oFADFerredoxin--NADP reductase1.18.1.2

Complex with similar cavities

PDB ID HET Uniprot Name EC Number Cavity
Similarity		 Align
2b5oFADFerredoxin--NADP reductase1.18.1.21.000
4af7FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.616
3mhpFADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.599
4af6FADFerredoxin--NADP reductase, leaf isozyme, chloroplastic1.18.1.20.529
1bjkFADFerredoxin--NADP reductase1.18.1.20.527
3vo2FADFerredoxin--NADP reductase/0.527
4c43FADFerredoxin--NADP reductase1.18.1.20.515
1qgyFADFerredoxin--NADP reductase1.18.1.20.513
1queFADFerredoxin--NADP reductase1.18.1.20.511
1e64FADFerredoxin--NADP reductase1.18.1.20.509
1h85FADFerredoxin--NADP reductase1.18.1.20.507
1h42FADFerredoxin--NADP reductase1.18.1.20.501
3zbtFADFerredoxin--NADP reductase1.18.1.20.501
4bprFADFerredoxin--NADP reductase1.18.1.20.500
2rc5FADFerredoxin--NADP reductase/0.498
3fpkFADFerredoxin-NADP reductase/0.498
1qh0FADFerredoxin--NADP reductase1.18.1.20.497
1sm4FADFerredoxin--NADP reductase/0.497
1gjrFADFerredoxin--NADP reductase1.18.1.20.495
1bx1FADFerredoxin--NADP reductase, chloroplastic1.18.1.20.493
1gawFADFerredoxin/0.492
1w35FADFerredoxin--NADP reductase1.18.1.20.492
1fnbFADFerredoxin--NADP reductase, chloroplastic1.18.1.20.483
1fncFDAFerredoxin--NADP reductase, chloroplastic1.18.1.20.480
1gaqFADFerredoxin/0.480
1b2rFADFerredoxin--NADP reductase1.18.1.20.478
1e62FADFerredoxin--NADP reductase1.18.1.20.477
3zc3FADFerredoxin--NADP reductase1.18.1.20.477
1e63FADFerredoxin--NADP reductase1.18.1.20.476
1go2FADFerredoxin--NADP reductase1.18.1.20.474
3w5uFADFerredoxin/0.474
2rc6FADFerredoxin--NADP reductase/0.473
1ogiFADFerredoxin--NADP reductase1.18.1.20.472
1ja1FADNADPH--cytochrome P450 reductase/0.458
4uajFADNa(+)-translocating NADH-quinone reductase subunit F/0.451
1gr1FADFerredoxin--NADP reductase1.18.1.20.450
1w87FADFerredoxin--NADP reductase1.18.1.20.450
2cndFADNitrate reductase [NADH]1.7.1.10.449
3qfsFADNADPH--cytochrome P450 reductase/0.449
1qgzFADFerredoxin--NADP reductase1.18.1.20.446
1j9zFADNADPH--cytochrome P450 reductase/0.444