sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 2b58 | COA | Diamine acetyltransferase 1 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 2b58 | COA | Diamine acetyltransferase 1 | / | 1.000 | |
| 2b3v | ACO | Diamine acetyltransferase 1 | / | 0.684 | |
| 2fxf | ACO | Diamine acetyltransferase 1 | / | 0.580 | |
| 3bj7 | COA | Diamine acetyltransferase 1 | / | 0.552 | |
| 2b4d | COA | Diamine acetyltransferase 1 | / | 0.495 | |
| 3tfy | COA | N-alpha-acetyltransferase 50 | 2.3.1 | 0.495 | |
| 3dy8 | 5GP | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.458 | |
| 3bj8 | COA | Diamine acetyltransferase 1 | / | 0.457 | |
| 1tiq | COA | Spermidine/spermine N(1)-acetyltransferase | / | 0.455 | |
| 2bei | ACO | Diamine acetyltransferase 2 | 2.3.1.57 | 0.453 | |
| 2psw | COA | N-alpha-acetyltransferase 50 | / | 0.450 | |
| 4xnh | ACO | N-terminal acetyltransferase A complex subunit NAT5 | 2.3.1 | 0.446 | |
| 2jev | NHQ | Diamine acetyltransferase 1 | / | 0.444 |