sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1ycf | FMN | Nitric oxide reductase | 1 |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 1ycf | FMN | Nitric oxide reductase | 1 | 1.000 | |
| 1ycg | FMN | Nitric oxide reductase | 1 | 0.631 | |
| 1ych | FMN | Nitric oxide reductase | 1 | 0.561 | |
| 2ohi | FMN | Type A flavoprotein FprA | 1 | 0.455 | |
| 1nup | NMN | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 | / | 0.449 | |
| 3dh7 | FMN | Isopentenyl-diphosphate delta-isomerase | / | 0.446 | |
| 1nuu | NAD | Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 | / | 0.444 |