Cavities are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 1jjt | BDS | Beta-lactamase |
| PDB ID | HET | Uniprot Name | EC Number | Cavity Similarity |
Align |
|---|---|---|---|---|---|
| 1jjt | BDS | Beta-lactamase | / | 1.000 | |
| 1jje | BYS | Beta-lactamase | / | 0.563 | |
| 4c1f | X8Z | Metallo-beta-lactamase type 2 | / | 0.513 | |
| 1dd6 | MCI | Metallo-beta-lactamase type 2 | / | 0.509 | |
| 1a8t | 061 | Metallo-beta-lactamase type 2 | / | 0.457 | |
| 4hl2 | ZZ7 | Metallo-beta-lactamase type 2 | / | 0.454 | |
| 4exs | X8Z | Metallo-beta-lactamase type 2 | / | 0.446 | |
| 4pnm | NU1 | Tankyrase-2 | 2.4.2.30 | 0.445 |