sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Distribution of Cavity similarities measured by Shaper

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Cavities are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1gzu	NMN	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1	2.7.7.1

Complex with similar cavities

PDB ID	HET	Uniprot Name	EC Number	Cavity Similarity	Align
1gzu	NMN	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1	2.7.7.1	1.000
1kr2	TAD	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1	2.7.7.1	0.533
1kqn	NAD	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1	2.7.7.1	0.497
1kqo	DND	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1	2.7.7.1	0.457
1nuu	NAD	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3	/	0.447
1nuq	NXX	Nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3	/	0.445