sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 5iua | 6DX | Adenosine receptor A2a |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 5iua | 6DX | Adenosine receptor A2a | / | 1.000 | |
| 5iu4 | ZMA | Adenosine receptor A2a | / | 0.760 | |
| 4eiy | ZMA | Adenosine receptor A2a | / | 0.690 | |
| 5k2a | ZMA | Adenosine receptor A2a | / | 0.654 | |
| 5k2b | ZMA | Adenosine receptor A2a | / | 0.644 | |
| 5k2c | ZMA | Adenosine receptor A2a | / | 0.637 | |
| 3eml | ZMA | Adenosine receptor A2a | / | 0.634 | |
| 5uvi | ZMA | Adenosine receptor A2a | / | 0.633 | |
| 5k2d | ZMA | Adenosine receptor A2a | / | 0.625 | |
| 5jtb | ZMA | Adenosine receptor A2a | / | 0.623 | |
| 5iub | CLR | Adenosine receptor A2a | / | 0.622 | |
| 5iu8 | 6DZ | Adenosine receptor A2a | / | 0.593 | |
| 3vg9 | ZMA | Adenosine receptor A2a | / | 0.508 | |
| 4uhr | NGI | Adenosine receptor A2a | / | 0.504 | |
| 4ug2 | NGI | Adenosine receptor A2a | / | 0.494 | |
| 3pwh | ZMA | Adenosine receptor A2a | / | 0.478 | |
| 5g53 | NEC | Adenosine receptor A2a | / | 0.474 | |
| 3uzc | T4E | Adenosine receptor A2a | / | 0.473 | |
| 4cjx | 9L9 | C-1-tetrahydrofolate synthase, cytoplasmic, putative | / | 0.472 | |
| 5dp2 | NAP | CurF | / | 0.469 | |
| 2ydo | ADN | Adenosine receptor A2a | / | 0.453 | |
| 4r21 | STR | Cytochrome P450 family 17 polypeptide 2 | / | 0.452 | |
| 4wo5 | 324 | Serine/threonine-protein kinase B-raf | 2.7.11.1 | 0.452 | |
| 3slk | NDP | Polyketide synthase extender module 2 | / | 0.450 | |
| 3qak | UKA | Adenosine receptor A2a | / | 0.449 | |
| 3rfm | CFF | Adenosine receptor A2a | / | 0.447 | |
| 3rey | XAC | Adenosine receptor A2a | / | 0.446 | |
| 2pr2 | DG1 | Enoyl-[acyl-carrier-protein] reductase [NADH] | 1.3.1.9 | 0.445 | |
| 4iaq | 2GM | 5-hydroxytryptamine receptor 1B | / | 0.445 | |
| 1bk0 | ACV | Isopenicillin N synthase | 1.21.3.1 | 0.444 | |
| 4ia3 | BIV | Vitamin D3 receptor A | / | 0.444 | |
| 3qm4 | PN0 | Cytochrome P450 2D6 | / | 0.441 | |
| 3uza | T4G | Adenosine receptor A2a | / | 0.441 | |
| 2vn0 | TDZ | Cytochrome P450 2C8 | / | 0.440 | |
| 3dr1 | C5D | Vitamin D3 receptor A | / | 0.440 |