scPDB - Distribution of Binding site Similarity values of 5g3s entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
5g3s	FDA	Flavin-dependent L-tryptophan oxidase VioA

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
5g3s	FDA	Flavin-dependent L-tryptophan oxidase VioA	/	1.000
5g3t	FDA	Flavin-dependent L-tryptophan oxidase VioA	/	0.620
4i58	FAD	Cyclohexylamine Oxidase	/	0.457
1tdo	FAD	L-amino-acid oxidase	1.4.3.2	0.454
2b9x	FAD	Putative aminooxidase	/	0.442