scPDB - Distribution of Binding site Similarity values of 5bqf entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
5bqf	NAP	Probable hydroxyacid dehydrogenase protein

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
5bqf	NAP	Probable hydroxyacid dehydrogenase protein	/	1.000
4xcv	NDP	Probable hydroxyacid dehydrogenase protein	/	0.632
4z0p	NDP	NAD-dependent dehydrogenase	/	0.479
4lcj	NAD	C-terminal-binding protein 2	/	0.478
2g76	NAD	D-3-phosphoglycerate dehydrogenase	1.1.1.95	0.466
4weq	NAP	NAD-dependent dehydrogenase	/	0.462
1dxy	NAD	D-2-hydroxyisocaproate dehydrogenase	1.1.1	0.459
3kbo	NDP	Glyoxylate/hydroxypyruvate reductase A	/	0.454
2ome	NAD	C-terminal-binding protein 2	/	0.445
2w2l	NAD	D-mandelate dehydrogenase	/	0.444