scPDB - Distribution of Binding site Similarity values of 4yek entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4yek	THM	Thymidine phosphorylase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4yek	THM	Thymidine phosphorylase	/	1.000
1iol	EST	Estradiol 17-beta-dehydrogenase 1	1.1.1.62	0.459
1obn	ASV	Isopenicillin N synthase	1.21.3.1	0.451
3dhe	AND	Estradiol 17-beta-dehydrogenase 1	1.1.1.62	0.450
4q71	FAD	Bifunctional protein PutA	/	0.447
2y6f	M9F	Isopenicillin N synthase	1.21.3.1	0.440