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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.11

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4xw4ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.111.000
4iacACPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.720
3x2wATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.623
3idbANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.599
3x2uATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.558
3x2vATPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.499
1ydtIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
3o7lANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.478
3e8cG96cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.472
2f7x4EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.469
2c1bCQPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.466
4ekkANPRAC-alpha serine/threonine-protein kinase2.7.11.10.457
1svhI08cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.455
4iakADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.453
2gu8796cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.449
2vo7M05cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.447
4qnyANPMitogen activated protein kinase, putative/0.447
2jdsL20cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
3vqhIQBcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
4dh5ADPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.446
4dg3ANPcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.443
1svgI04cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
2ojf4PYcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.442
2f7z6EAcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.441
1xh9R69cAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440