Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4x3q | SAH | SibL |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
4x3q | SAH | SibL | / | 1.000 | |
3reo | SAH | (Iso)eugenol O-methyltransferase | 2.1.1.146 | 0.534 | |
5icf | SAH | (S)-norcoclaurine 6-O-methyltransferase | / | 0.474 | |
3gxo | SAH | Mitomycin biosynthesis 6-O-methyltransferase | / | 0.470 | |
4a6d | SAM | Acetylserotonin O-methyltransferase | 2.1.1.4 | 0.468 | |
5jr3 | SAH | Carminomycin 4-O-methyltransferase DnrK | 2.1.1.292 | 0.451 | |
1qzz | SAM | Aclacinomycin 10-hydroxylase RdmB | 4.1.1 | 0.447 |