scPDB - Distribution of Binding site Similarity values of 4qm6 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4qm6	GTP	Metallophosphoesterase

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4qm6	GTP	Metallophosphoesterase	/	1.000
4jsy	GTP	Metallophosphoesterase	/	0.623
4gp6	ADP	Metallophosphoesterase	/	0.556
4y8v	ADP	Acyl-CoA synthetase (NDP forming)	/	0.497
4biz	ADP	Sensor histidine kinase CpxA	/	0.454
1rj9	GCP	Signal recognition particle receptor FtsY	/	0.453
1zm7	TTP	Deoxynucleoside kinase	/	0.447
4xj3	GTP	Cyclic GMP-AMP synthase	/	0.440