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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.592
4m87NADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.592
4o1mNADEnoyl-acyl carrier reductase/0.578
4zjuNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.572
5koiNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.563
1vrwNAIEnoyl-ACP reductase/0.552
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.551
1v35NAIEnoyl-ACP reductase/0.534
2aqiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.533
2nq8ZIDEnoyl-ACP reductase/0.526
4trnNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.525
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.522
2aqkNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.519
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.496
2h9iEADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.495
2q2qNADBeta-D-hydroxybutyrate dehydrogenase/0.463
2dteNAIGlucose 1-dehydrogenase related protein/0.455
4bkqNAIEnoyl-[acyl-carrier-protein] reductase [NADH]/0.453
4c7kNAPCorticosteroid 11-beta-dehydrogenase isozyme 11.1.1.1460.451
3f1kNAPUncharacterized oxidoreductase YciK10.449
4nbtNAD3-oxoacyl-[acyl-carrier-protein] reductase/0.444
3bhiNAPCarbonyl reductase [NADPH] 11.1.1.1840.440