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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4oviN01Phenylacetone monooxygenase1.14.13.92

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4oviN01Phenylacetone monooxygenase1.14.13.921.000
4c77N01Phenylacetone monooxygenase1.14.13.920.625
4d03NAPPhenylacetone monooxygenase1.14.13.920.601
2ylxNAPPhenylacetone monooxygenase1.14.13.920.600
2ylrNAPPhenylacetone monooxygenase1.14.13.920.596
4d04NAPPhenylacetone monooxygenase1.14.13.920.594
2yltNAPPhenylacetone monooxygenase1.14.13.920.586
2ylwNAPPhenylacetone monooxygenase1.14.13.920.555
2ym2NAPPhenylacetone monooxygenase1.14.13.920.548
2ym1NAPPhenylacetone monooxygenase1.14.13.920.546
3up4NAP2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.480
3gwdNAPCyclohexanone monooxygenase/0.476