scPDB - Distribution of Binding site Similarity values of 4nxv entry / Site 4

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
4nxv	GDP	Mitochondrial dynamics protein MID51

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
4nxv	GDP	Mitochondrial dynamics protein MID51	/	1.000
4nxw	ADP	Mitochondrial dynamics protein MID51	/	0.619
4nxu	ADP	Mitochondrial dynamics protein MID51	/	0.617
4nxx	GDP	Mitochondrial dynamics protein MID51	/	0.558
4oag	ADP	Mitochondrial dynamics protein MID51	/	0.547