Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4lgaA2OAbscisic acid receptor PYL2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4lgaA2OAbscisic acid receptor PYL2/1.000
4lg5A1OAbscisic acid receptor PYL2/0.639
3kdiA8SAbscisic acid receptor PYL2/0.587
4oicA8SBet v I allergen-like/0.580
3zvuA8SAbscisic acid receptor PYR1/0.578
3kdjA8SAbscisic acid receptor PYL1/0.568
3k3kA8SAbscisic acid receptor PYR1/0.565
3kb3A8SAbscisic acid receptor PYL2/0.557
4ds8A8SAbscisic acid receptor PYL3/0.551
3negPYVAbscisic acid receptor PYL1/0.548
3ujlA8SAbscisic acid receptor PYL2/0.544
3w9rA8SAbscisic acid receptor PYL9/0.541
4la7A1OAbscisic acid receptor PYL2/0.535
3kb0A8SAbscisic acid receptor PYL2/0.528
4jdaA9SAbscisic acid receptor PYL3/0.523
3njoPYVAbscisic acid receptor PYR1/0.522
3nmpPYVAbscisic acid receptor PYL2/0.515
3nmnPYVAbscisic acid receptor PYL1/0.512
3nefPYVAbscisic acid receptor PYL1/0.500
3ns2PYVAbscisic acid receptor PYL2/0.499
3nj0PYVAbscisic acid receptor PYL2/0.498
4dscA8SAbscisic acid receptor PYL3/0.496
3qn1A8SAbscisic acid receptor PYR1/0.490
3nmhPYVAbscisic acid receptor PYL2/0.489
3k90A8SAbscisic acid receptor PYR1/0.486
3nr4PYVAbscisic acid receptor PYL2/0.483
3njoP2MAbscisic acid receptor PYR1/0.473
3r6pA8SAbscisic acid receptor PYL10/0.470
4kak06UDihydrofolate reductase1.5.1.30.469
3oquA8SAbscisic acid receptor PYL9/0.466
3u8hBHPPhospholipase A2, membrane associated/0.461
3ojiPYVAbscisic acid receptor PYL3/0.459
1m8h6NINitric oxide synthase, inducible1.14.13.390.457
3e7iB2Nitric oxide synthase, inducible1.14.13.390.455
3nmvPYVAbscisic acid receptor PYL2/0.455
3h3r14HCollagen type IV alpha-3-binding protein/0.449
4fjz4FJPhosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform2.7.1.1530.449
1m9k7NINitric oxide synthase, endothelial1.14.13.390.448
1dhiMTXDihydrofolate reductase1.5.1.30.447
3ml8ML8Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform2.7.1.1530.447
3gwfNAPCyclohexanone monooxygenase/0.445
5cpbNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.443
4hnc0UTMandelate racemase/0.440