Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4ldkFADFAD-linked sulfhydryl oxidase ALR1.8.3.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4ldkFADFAD-linked sulfhydryl oxidase ALR1.8.3.21.000
3tk0FADFAD-linked sulfhydryl oxidase ALR1.8.3.20.586
3r7cFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.566
3u2lFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.566
3u5sFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.564
3mbgFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.551
1oqcFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.545
3u2mFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.524
4e0iFADMitochondrial FAD-linked sulfhydryl oxidase ERV11.8.3.20.488
4e0hFADMitochondrial FAD-linked sulfhydryl oxidase ERV11.8.3.20.486
3w4yFADMitochondrial FAD-linked sulfhydryl oxidase ERV11.8.3.20.477
1jraFADFAD-linked sulfhydryl oxidase ERV21.8.3.20.465
1jr8FADFAD-linked sulfhydryl oxidase ERV21.8.3.20.461
1xddAAYIntegrin alpha-L/0.454
2hrcCHDFerrochelatase, mitochondrial4.99.1.10.450
2hj3FADFAD-linked sulfhydryl oxidase ERV1/0.441