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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4hkfACOAlpha-tubulin N-acetyltransferase 1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
4hkfACOAlpha-tubulin N-acetyltransferase 1/1.000
4gs4ACOAlpha-tubulin N-acetyltransferase 1/0.596
3vweCOAAlpha-tubulin N-acetyltransferase 1/0.585
4if5ACOAlpha-tubulin N-acetyltransferase 1/0.581
4u9zCOAAlpha-tubulin N-acetyltransferase 1/0.571
4b5oACOAlpha-tubulin N-acetyltransferase 1/0.567
3vwdACOAlpha-tubulin N-acetyltransferase 1/0.566
4b5pACOAlpha-tubulin N-acetyltransferase 1/0.557
4h6zACOAlpha-tubulin N-acetyltransferase 1/0.556
4u9yCOAAlpha-tubulin N-acetyltransferase 1/0.539
4h6uACOAlpha-tubulin N-acetyltransferase 1/0.503
2pswCOAN-alpha-acetyltransferase 50/0.502
4mxeACON-acetyltransferase ESCO12.3.10.490
2ob0ACON-alpha-acetyltransferase 50/0.488
3tfyCOAN-alpha-acetyltransferase 502.3.10.484
2wpwACOOrf14/0.476
2wpxACOOrf14/0.463
2cy2ACOProbable acetyltransferase/0.459
3f0aACOSpermidine N(1)-acetyltransferase/0.459
2a4nCOAAac(6')-Ii protein/0.456
3k9uACOSpermidine N(1)-acetyltransferase/0.455
4u9vACON-alpha-acetyltransferase 402.3.10.454
5ejaTD62-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase/0.444
2gesCOKPantothenate kinase2.7.1.330.443
1rf7DHFDihydrofolate reductase1.5.1.30.442