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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4ge70K5Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.39

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4ge70K5Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.391.000
4gdy0X1Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.602
4ge40KEKynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.585
4ge90L0Kynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.529
4geb0LDKynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.497
2r2nKYNKynurenine/alpha-aminoadipate aminotransferase, mitochondrial2.6.1.390.453
1gg5FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.450
1kboFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.441
3te5NAI5'-AMP-activated protein kinase subunit gamma/0.440