Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4exs | X8Z | Metallo-beta-lactamase type 2 |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
4exs | X8Z | Metallo-beta-lactamase type 2 | / | 1.000 | |
4c1f | X8Z | Metallo-beta-lactamase type 2 | / | 0.510 | |
4hl1 | ZZ7 | Metallo-beta-lactamase type 2 | / | 0.487 | |
4hl2 | ZZ7 | Metallo-beta-lactamase type 2 | / | 0.485 | |
1dd6 | MCI | Metallo-beta-lactamase type 2 | / | 0.483 | |
4h0d | ZZ7 | Metallo-beta-lactamase type 2 | / | 0.480 | |
1u1f | 183 | Uridine phosphorylase | 2.4.2.3 | 0.472 | |
3iog | SDF | Metallo-beta-lactamase type 2 | / | 0.460 | |
1hlk | 113 | Metallo-beta-lactamase type 2 | / | 0.458 | |
4c1h | X8Z | Metallo-beta-lactamase type 2 | / | 0.458 | |
4raw | ZZ7 | Metallo-beta-lactamase type 2 | / | 0.456 | |
2vcx | D26 | Hematopoietic prostaglandin D synthase | / | 0.447 | |
4a83 | DXC | Major pollen allergen Bet v 1-A | / | 0.444 | |
1r8q | AFB | Cytohesin-2 | / | 0.441 | |
1r8q | AFB | ADP-ribosylation factor 1 | / | 0.441 |