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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
4c77N01Phenylacetone monooxygenase1.14.13.92

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
4c77N01Phenylacetone monooxygenase1.14.13.921.000
4oviN01Phenylacetone monooxygenase1.14.13.920.638
4d03NAPPhenylacetone monooxygenase1.14.13.920.609
4d04NAPPhenylacetone monooxygenase1.14.13.920.608
2ylxNAPPhenylacetone monooxygenase1.14.13.920.600
2ym1NAPPhenylacetone monooxygenase1.14.13.920.585
2ylrNAPPhenylacetone monooxygenase1.14.13.920.580
2yltNAPPhenylacetone monooxygenase1.14.13.920.577
2ym2NAPPhenylacetone monooxygenase1.14.13.920.577
2ylwNAPPhenylacetone monooxygenase1.14.13.920.543
3gwdNAPCyclohexanone monooxygenase/0.492
3up4NAP2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.484
3up5NAP2-oxo-Delta(3)-4,5,5-trimethylcyclopentenylacetyl-CoA monooxygenase1.14.13.1600.449