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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3vswR31Renin3.4.23.15

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3vswR31Renin3.4.23.151.000
3vsxR32Renin3.4.23.150.639
3vyfVYFRenin3.4.23.150.596
3own3OXRenin3.4.23.150.589
3vucHHERenin3.4.23.150.573
3vydVYDRenin3.4.23.150.572
1bim0QBRenin3.4.23.150.565
1rneC60Renin3.4.23.150.560
2g20L1ARenin3.4.23.150.556
3vyeVYERenin3.4.23.150.551
1bil0IURenin3.4.23.150.544
2v16C47Renin3.4.23.150.537
3own3OWRenin3.4.23.150.528
2v13C40Renin3.4.23.150.521
3d91REMRenin3.4.23.150.516
2i4qUA4Renin3.4.23.150.501
3oqfS51Renin3.4.23.150.486
2g1o2IGRenin3.4.23.150.482
3oqkS52Renin3.4.23.150.474
2g1s4IGRenin3.4.23.150.469
2g226IGRenin3.4.23.150.469
2ikuLIYRenin3.4.23.150.469
2g1r3IGRenin3.4.23.150.465
2fs4PZ1Renin3.4.23.150.459
2g247IGRenin3.4.23.150.454
2il2LIXRenin3.4.23.150.454
3oadLPORenin3.4.23.150.454
2g1y5IGRenin3.4.23.150.451
2g21L1BRenin3.4.23.150.451
3g6zA7TRenin3.4.23.150.449
2g263LGRenin3.4.23.150.444