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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3tk0FADFAD-linked sulfhydryl oxidase ALR1.8.3.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3tk0FADFAD-linked sulfhydryl oxidase ALR1.8.3.21.000
3u5sFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.758
3u2lFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.639
3u2mFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.631
1oqcFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.603
3r7cFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.582
4ldkFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.578
3mbgFADFAD-linked sulfhydryl oxidase ALR1.8.3.20.535
2hj3FADFAD-linked sulfhydryl oxidase ERV1/0.513
4e0iFADMitochondrial FAD-linked sulfhydryl oxidase ERV11.8.3.20.513
4e0hFADMitochondrial FAD-linked sulfhydryl oxidase ERV11.8.3.20.497
3w4yFADMitochondrial FAD-linked sulfhydryl oxidase ERV11.8.3.20.482
1jr8FADFAD-linked sulfhydryl oxidase ERV21.8.3.20.480
3gwlFADFAD-linked sulfhydryl oxidase1.8.3.20.476
4p2lFADSulfhydryl oxidase 11.8.3.20.451
3jswJARHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.446