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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3sayOFTGlycogen synthase kinase-3 beta2.7.11.26

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3sayOFTGlycogen synthase kinase-3 beta2.7.11.261.000
3i4bZ48Glycogen synthase kinase-3 beta2.7.11.260.500
4acc7YGGlycogen synthase kinase-3 beta2.7.11.260.495
4acdGR9Glycogen synthase kinase-3 beta2.7.11.260.470
4acg6LQGlycogen synthase kinase-3 beta2.7.11.260.470
4dit0KDGlycogen synthase kinase-3 beta2.7.11.260.459
2w05FRTCyclin-dependent kinase 22.7.11.220.450
1q41IXMGlycogen synthase kinase-3 beta2.7.11.260.449
4achKDIGlycogen synthase kinase-3 beta2.7.11.260.449
4j1rI5RGlycogen synthase kinase-3 beta2.7.11.260.449
1uv5BRWGlycogen synthase kinase-3 beta2.7.11.260.445
3gb2G3BGlycogen synthase kinase-3 beta2.7.11.260.444
3ezrEZRCyclin-dependent kinase 22.7.11.220.441
3f7z34OGlycogen synthase kinase-3 beta2.7.11.260.441
3rak03ZCyclin-dependent kinase 22.7.11.220.440
4c34STUcAMP-dependent protein kinase catalytic subunit alpha2.7.11.110.440