scPDB - Distribution of Binding site Similarity values of 3ql6 entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3ql6	NIM	Lactoperoxidase	1.11.1.7

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3ql6	NIM	Lactoperoxidase	1.11.1.7	1.000
3ogw	IMN	Lactoperoxidase	1.11.1.7	0.637
3fnl	SHA	Lactoperoxidase	/	0.573
3uba	HC4	Lactoperoxidase	1.11.1.7	0.566
3py4	TYL	Lactoperoxidase	1.11.1.7	0.558
3tgy	ASC	Lactoperoxidase	1.11.1.7	0.553
4c1m	NIH	Myeloperoxidase	1.11.2.2	0.534
4qjq	OTR	Lactoperoxidase	/	0.515
4gn6	TYL	Lactoperoxidase	1.11.1.7	0.472
4nt3	ZAW	Lactoperoxidase	1.11.1.7	0.456