Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
3n63XFNNitric oxide synthase, brain1.14.13.39

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
3n63XFNNitric oxide synthase, brain1.14.13.391.000
3n60XFNNitric oxide synthase, brain1.14.13.390.682
3n66XFNNitric oxide synthase, brain1.14.13.390.661
1zzrDP9Nitric oxide synthase, brain1.14.13.390.551
2hx44HXNitric oxide synthase, brain1.14.13.390.528
3n65XFJNitric oxide synthase, brain1.14.13.390.520
3n61XFJNitric oxide synthase, brain1.14.13.390.518
3nlqJRRNitric oxide synthase, brain1.14.13.390.513
3n62XFJNitric oxide synthase, brain1.14.13.390.502
3n5wXFJNitric oxide synthase, brain1.14.13.390.498
3b3oJI3Nitric oxide synthase, brain1.14.13.390.497
4cx4HW9Nitric oxide synthase, brain1.14.13.390.494
3n5zXFMNitric oxide synthase, brain1.14.13.390.490
3n5xXFKNitric oxide synthase, brain1.14.13.390.482
4k5fQ14Nitric oxide synthase, brain1.14.13.390.481
4jshQ15Nitric oxide synthase, brain1.14.13.390.478
1zzuDP1Nitric oxide synthase, brain1.14.13.390.468
4imu1ETNitric oxide synthase, brain1.14.13.390.467
3rqjY2BNitric oxide synthase, brain1.14.13.390.466
3jx3JI5Nitric oxide synthase, brain1.14.13.390.463
4k5e1Q7Nitric oxide synthase, brain1.14.13.390.458
3jwuJ11Nitric oxide synthase, brain1.14.13.390.452
3ufqHW5Nitric oxide synthase, brain1.14.13.390.452
3nny59RNitric oxide synthase, brain1.14.13.390.450
3tym08RNitric oxide synthase, brain1.14.13.390.447
3ufrH5WNitric oxide synthase, brain1.14.13.390.447
3jx4J11Nitric oxide synthase, brain1.14.13.390.446
3nlv3XANitric oxide synthase, brain1.14.13.390.446
3tylAXWNitric oxide synthase, brain1.14.13.390.446
3nlkJSSNitric oxide synthase, brain1.14.13.390.445
3nlw3XFNitric oxide synthase, brain1.14.13.390.445
4euxHW1Nitric oxide synthase, brain1.14.13.390.444
1zzqDP9Nitric oxide synthase, brain1.14.13.390.443
3nlpJSSNitric oxide synthase, brain1.14.13.390.443
3n5yXFLNitric oxide synthase, brain1.14.13.390.442
3b3pJI7Nitric oxide synthase, brain1.14.13.390.441
3jwtJI5Nitric oxide synthase, brain1.14.13.390.440
3nloJSRNitric oxide synthase, brain1.14.13.390.440