scPDB - Distribution of Binding site Similarity values of 3mey entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3mey	ATP	Amino acid--[acyl-carrier-protein] ligase 1	6.2.1.n2

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3mey	ATP	Amino acid--[acyl-carrier-protein] ligase 1	6.2.1.n2	1.000
3pzc	GAP	Amino acid--[acyl-carrier-protein] ligase 1	6.2.1.n2	0.603
4h2u	ATP	Amino acid--[acyl-carrier-protein] ligase 1	6.2.1.n2	0.556
4h2w	5GP	Amino acid--[acyl-carrier-protein] ligase 1	6.2.1.n2	0.544
3a5y	KAA	Elongation factor P--(R)-beta-lysine ligase	/	0.461