Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3fc6 | REA | Retinoic acid receptor RXR-alpha |
| PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
|---|---|---|---|---|---|
| 3fc6 | REA | Retinoic acid receptor RXR-alpha | / | 1.000 | |
| 3fal | REA | Retinoic acid receptor RXR-alpha | / | 0.597 | |
| 2p1v | 5TN | Retinoic acid receptor RXR-alpha | / | 0.527 | |
| 1fm6 | 9CR | Retinoic acid receptor RXR-alpha | / | 0.501 | |
| 2acl | REA | Retinoic acid receptor RXR-alpha | / | 0.499 | |
| 1fby | REA | Retinoic acid receptor RXR-alpha | / | 0.498 | |
| 3uvv | REA | Retinoic acid receptor RXR-alpha | / | 0.497 | |
| 2p1u | 4TN | Retinoic acid receptor RXR-alpha | / | 0.494 | |
| 1rdt | L79 | Retinoic acid receptor RXR-alpha | / | 0.482 | |
| 1k74 | 9CR | Retinoic acid receptor RXR-alpha | / | 0.480 | |
| 1fm9 | 9CR | Retinoic acid receptor RXR-alpha | / | 0.478 | |
| 1xiu | REA | Retinoic acid receptor RXR | / | 0.475 | |
| 3oap | REA | Retinoic acid receptor RXR-alpha | / | 0.464 | |
| 1xls | REA | Retinoic acid receptor RXR-alpha | / | 0.451 | |
| 3oag | LPQ | Renin | 3.4.23.15 | 0.451 | |
| 3p99 | LNP | Lanosterol 14-alpha-demethylase | / | 0.451 | |
| 1mzn | BM6 | Retinoic acid receptor RXR-alpha | / | 0.450 | |
| 2p1t | 3TN | Retinoic acid receptor RXR-alpha | / | 0.449 | |
| 1mvc | BM6 | Retinoic acid receptor RXR-alpha | / | 0.446 | |
| 1uhl | MEI | Retinoic acid receptor RXR-beta | / | 0.444 | |
| 3g70 | A5T | Renin | 3.4.23.15 | 0.442 | |
| 3g6z | A7T | Renin | 3.4.23.15 | 0.441 | |
| 4m8h | R4M | Retinoic acid receptor RXR-alpha | / | 0.441 | |
| 4gl4 | NAI | Alcohol dehydrogenase class-3 | / | 0.440 |