Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3dzl | 3OC | Phenazine biosynthesis protein A/B |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3dzl | 3OC | Phenazine biosynthesis protein A/B | / | 1.000 | |
3juo | AJD | Phenazine biosynthesis protein A/B | / | 0.577 | |
3jun | AJD | Phenazine biosynthesis protein A/B | / | 0.541 | |
3juq | AJD | Phenazine biosynthesis protein A/B | / | 0.538 | |
3b4p | 3B4 | Phenazine biosynthesis protein A/B | / | 0.536 | |
3juq | AKD | Phenazine biosynthesis protein A/B | / | 0.459 | |
1lb9 | DNQ | Glutamate receptor 2 | / | 0.442 |