scPDB - Distribution of Binding site Similarity values of 3dxj entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3dxj	NE6	DNA-directed RNA polymerase subunit beta

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3dxj	NE6	DNA-directed RNA polymerase subunit beta	/	1.000
3dxj	NE6	DNA-directed RNA polymerase subunit beta'	/	1.000
3eql	MXP	DNA-directed RNA polymerase subunit beta	/	0.450
3eql	MXP	DNA-directed RNA polymerase subunit beta'	/	0.450
3aba	FLI	Cytochrome P450	/	0.449
4aw3	MYV	Mycinamicin IV hydroxylase/epoxidase	/	0.444