scPDB - Distribution of Binding site Similarity values of 3dhc entry / Site 1

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
3dhc	CYK	N-acyl homoserine lactonase AiiA	3.1.1.81

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
3dhc	CYK	N-acyl homoserine lactonase AiiA	3.1.1.81	1.000
3dhb	C6L	N-acyl homoserine lactonase AiiA	3.1.1.81	0.616
3dha	C6L	N-acyl homoserine lactonase AiiA	3.1.1.81	0.510
4uwm	FMN	3,6-diketocamphane 1,6 monooxygenase	1.14.13	0.449
4f4d	CHD	Ferrochelatase, mitochondrial	4.99.1.1	0.440