Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
3c1o | NAP | Eugenol synthase |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
3c1o | NAP | Eugenol synthase | / | 1.000 | |
2qw8 | NAP | Eugenol synthase 1 | 1.1.1.318 | 0.576 | |
2qx7 | NAP | Eugenol synthase 1 | 1.1.1.318 | 0.540 | |
2r6j | NDP | Eugenol synthase 1 | 1.1.1.318 | 0.540 | |
3c3x | NAP | Eugenol synthase 1 | 1.1.1.318 | 0.495 | |
2get | COK | Pantothenate kinase | 2.7.1.33 | 0.470 | |
2ges | COK | Pantothenate kinase | 2.7.1.33 | 0.455 | |
2uxo | TAC | HTH-type transcriptional regulator TtgR | / | 0.449 | |
3dyq | PCG | High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A | / | 0.449 | |
3zkp | ERB | Erythromycin C-12 hydroxylase | 1.14.13.154 | 0.445 | |
4b12 | C23 | Glycylpeptide N-tetradecanoyltransferase | / | 0.443 | |
4dbw | 511 | Aldo-keto reductase family 1 member C3 | / | 0.443 |