scPDB - Distribution of Binding site Similarity values of 2yr5 entry / Site 2

Distribution of Binding site similarity measured by Shaper

You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2yr5	FAD	Phenylalanine 2-monooxygenase precursor	1.13.12.9

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2yr5	FAD	Phenylalanine 2-monooxygenase precursor	1.13.12.9	1.000
2z1m	NDP	GDP-mannose 4,6-dehydratase	/	0.459
1w4x	FAD	Phenylacetone monooxygenase	1.14.13.92	0.448
3jsk	AHZ	Thiamine thiazole synthase	/	0.448
2cf6	NAP	Cinnamyl alcohol dehydrogenase 5	1.1.1.195	0.445
4d03	FAD	Phenylacetone monooxygenase	1.14.13.92	0.443