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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2xvhFADPutative flavin-containing monooxygenase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2xvhFADPutative flavin-containing monooxygenase/1.000
2vq7FADPutative flavin-containing monooxygenase/0.636
2xlpFADPutative flavin-containing monooxygenase/0.636
2xviFADPutative flavin-containing monooxygenase/0.635
2vqbFADPutative flavin-containing monooxygenase/0.624
2xvfFADPutative flavin-containing monooxygenase/0.609
2xlrFADPutative flavin-containing monooxygenase/0.602
2xveFADPutative flavin-containing monooxygenase/0.585
2xlsFADPutative flavin-containing monooxygenase/0.558
2ym1FADPhenylacetone monooxygenase1.14.13.920.463
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.448