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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2v13C40Renin3.4.23.15

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2v13C40Renin3.4.23.151.000
3vswR31Renin3.4.23.150.592
3vucHHERenin3.4.23.150.571
2v16C47Renin3.4.23.150.567
3vyeVYERenin3.4.23.150.558
3vyfVYFRenin3.4.23.150.557
3vsxR32Renin3.4.23.150.549
1rneC60Renin3.4.23.150.547
3own3OWRenin3.4.23.150.532
3own3OXRenin3.4.23.150.528
2g20L1ARenin3.4.23.150.522
3vydVYDRenin3.4.23.150.522
1bim0QBRenin3.4.23.150.510
2g1r3IGRenin3.4.23.150.492
3oqkS52Renin3.4.23.150.492
1bil0IURenin3.4.23.150.489
2i4qUA4Renin3.4.23.150.486
3d91REMRenin3.4.23.150.482
2g1o2IGRenin3.4.23.150.471
2il2LIXRenin3.4.23.150.465
2g1s4IGRenin3.4.23.150.460
2g263LGRenin3.4.23.150.460
2g226IGRenin3.4.23.150.457
2g247IGRenin3.4.23.150.456
2g21L1BRenin3.4.23.150.451
2ikuLIYRenin3.4.23.150.451
2g1y5IGRenin3.4.23.150.450
3oadLPORenin3.4.23.150.448
2fs4PZ1Renin3.4.23.150.445
3g6zA7TRenin3.4.23.150.442